Computer Codes for the Biophysical Journal 2007 Publication

The computer programs below are for Biophysical Journal, vol. 92, pp. 1544-1555, March 2007. They are for models of glycolytic oscillations, and glycoltic oscillations coupled to mitochondrial metabolism and beta-cell electrical and calcium activity. The programs run with the XPPAUT computer software. XPPAUT is free, and runs on Unix, Linux, and Windows machines. It can be downloaded from the website of Bard Ermentrout .

• The full beta-cell model
  This program has electrical, calcium, glycolytic, and mitochondrial components. It was used to make Figures 2, 3, 4, and 6. Full.ode


• The full beta-cell model with two types of PFK
  This is the full beta-cell model, but with both M-type (oscillatory) and C-type (non-oscillatory) PFK. It was used to make Figures 7 and 8. Full_2pfk.ode


• Glycolytic oscillations with two types of PFK
  This program was used to make Figure 9. GOs.ode