Computer Codes for the SIAM J. Applied Dynamical Systems Publication

The computer programs below are for SIADS, vol. 13, pp. 683-703, 2014. The programs run with the XPPAUT computer software. XPPAUT is free, and runs on Unix, Linux, and Windows machines. It can be downloaded from the website of Bard Ermentrout .

• The Dual Oscillator Model (DOM)
  This is the basis of the reduced model. DOM.ode


• The reduced DOM
  This was used in Figures 2, 3, 7, and 8. ReducedDOM.ode


• The forced glycolytic subsystem
  This was used in Figures 4 and 5. Forced.ode


• The dual phase plane model
  This was used in Figures 6 and 7. DualPhasePlane.ode