Fellow & PMMB Tenure | Institution | Mentor | Research Area | E-Mail |
Akmaev, Viatcheslav
(Graduate)
07/01/99-07/31/00 |
U. of Washington |
Prof. John Williamson
Prof.
Gary Stormo |
Phylogenetic and Statistical Approach to Protein Structure Prediction |
 |
Current Position: Staff Scientist I, Genzyme Corporation |
* Bakajin, Olgica
(Graduate)
09/01/98-08/31/00 |
Princeton University |
Prof. Robert H. Austin |
Transverse Pulse-Field DNA Fractionation in Microfabricated Arrays |
|
Currently a Lawrence Livermore Postdoctoral Fellow |
* Ball, Keith
(Postdoctoral)
10/01/99-09/31/01 |
U. of California |
Prof.
Ken Dill |
Development of a Fast Conformational Search Algorithm for Protein Folding |
|
Currently a Senior Software Engineer in the Bioinformatics Group at Large Scale Biology Corp (Vacaville, CA) |
* Ben-Dor,
Amir
(Postdoctoral)
01/15/98-01/14/00 |
U of Washington |
Prof. Richard Karp |
Radiation Hybrid Mapping of the Human Genome |
|
Molecular Diagnostic Department, Analytical Medical Laboratory, Agilent Labs, Agilent Technologies |
Betterton, Meredith
(Graduate)
07/01/98-06/30/00 |
M.I.T. |
Prof. Michael Brenner |
Electrostatic Edge Instability of Lipid Membranes
| |
Currently has a Chateaubriand fellowship at the Curie Institute in Paris |
* Buck,
Dorothy
(Graduate)
09/01/97-08/31/99 |
University of Texas |
Prof. Makkuni Jayaram |
The Topological Aspects of Rearrangement Reactions Involving DNA |
|
Currently an Assistant Professor in the Division of Applied Mathematics, Brown University |
* Choi, Vicky
(Graduate)
01/01/01-12/31/01
02/26/02-08/09/02 |
Rutgers
Case Western Reserve University |
Prof.
Martin Farach-Colton
Prof. Evan Eichler |
Heterogeneous Approaches to Protein Libraries |
|
** Cluzel, Philippe
(Postdoctoral)
08/01/99-07/31/00 |
Princeton |
Prof. Stanislas Leibler |
Non-Genetic Individuality and Noise in Gene Regulation |
|
Current Position: Assistant Professor, Physics Dept., University of Chicago |
** Doerge,
Rebecca
(Graduate)
08/01/90-12/31/92 |
NC State University |
Prof. Burce Weir |
Statistical Methods for Locating Quantitive Trait Loci With Molecular Markers |
|
Current Position: Associate Professor, Statistics Department, Purdue University |
* Dudoit,
Sandrine
(Graduate & Postdoctoral)
03/01/97-06/01/98
07/01/00-06/30/01 |
Stanford University |
Prof.
Patrick O. Brown |
Statistical Analysis of Gene Expression Data from DNA Micro-Array Experiments |
|
Current Position: Assistant Professor, Division
of Biostatistics, School of Public Health, University of California, Berkeley |
Frankel, Ernest
(Postdoctoral)
6/1/01-5/31/02 |
M.I.T. |
Prof. Bonnie Berger |
Integrated Approach to Understanding Protein Specificity |
|
* Helms, Volkhard
(Postdoctoral)
08/01/97-09/30/98 |
University of California, San Diego |
Prof. J.A. McMammon |
Intramolecular and Supramolecular Protein Motion from Stochastic Dynamics Stimulation |
|
Current Position: Group Leader of Theoretical Biophysics Research Group at Max-Planck-Institute for Biophysics, Research Group for Theoretical Biophysics, Frankfurt (Main), Germany |
** Heyer, Laurie
(Postdoctoral)
09/01/98-08/31/00 |
U. of Southern California |
Prof. Michael Waterman |
A New Metric for the Construction of Phylogenetic Trees |
|
Current Position: Assistant Professor, Department of Mathematics, Davidson College |
** Kececioglu, John
(Postdoctoral)
11/01/91-10/31/93 |
University of California, Davis |
Prof. Dan Gusfield |
Algorithms for Assembling Ordered Clone Libraries and Multiple Sequence |
|
Current Position: Associate Professor, University of Arizona, Department of Computer Science |
* Kerr, Kathleen
(Postdoctoral)
08/16/00-08/15/01 |
The Jackson Laboratory |
Prof. Gary A. Churchill |
Statistical Design and Analysis of Expression Microarray Experiments |
|
* Khodursky,
Arkady
(Postdoctoral)
07/01/98-06/30/00 |
Stanford University |
Prof.
Patrick O. Brown |
Dissection of Regulatory Transcription Networks in Yeast Saccharomyces Cerevisiae |
|
** Kostov, Konstantin
(Postdoctoral)
01/01/98-12/31/99 |
University of Chicago |
Prof.
R. Stephen Berry |
Statistical Analysis of the Topography and Dynamics of the Potential Energy Surfaces of Proteins and their Relation to Protein Folding |
|
Currently a Research Associate at the Department of Chemistry, the University of Chicago |
** Lazaridis, Themis
(Postdoctoral)
02/01/98-06/30/98 |
Harvard University |
Prof. Martin Karplus |
Development and Application of Implicit Solvation Models for Proteins |
|
Current Position: Assistant Professor, Department of Chemistry, City College of New York |
** Liu, Canwen
07/01/96-06/30/98 |
Harvard University |
Prof. Daniel Jay |
Mathematical Modeling of Axon Guidance in Haptotaxis |
|
Currently a Postdoctoral Fellow, Biochemistry of Neuronal Development, Jay Laboratory |
Louzoun, Yoram
(Postdoctoral)
7/1/02-6/30/03 |
Princeton |
Prof. Martin Weigert |
Comparative Analysis of Lymphocyte Rearrangement Process |
|
Currently in the Math Department, Bar-Ilan University |
** Lowenstein, Michael
09/01/98-08/31/00 |
University of California, San Francisco |
Prof. John Sedat |
The Use of a Color Bar Code for Determining the Spatial Configuration of Chromosomes with Nuclei |
|
Currently continuing Ph.D. studies in the Biohphysics Graduate Group at UCSF with thesis advisor Dr. John Sedat |
** Lundstrom, Rom
(Postdoctoral)
1/01/90-10/31/92 |
University of Utah |
Prof. Ryk Ward |
Mathematical Models for Population Surveys of DNA Sequences |
|
* Lyngsoe,
Rune
(Postdoctoral)
12/01/00-11/30/01 |
University of California, Santa Cruz |
Prof. David Haussler |
Domain Finding in the Human Genome |
|
* Ma,
Jianpeng
(Postdoctoral)
07/01/97-01/31/98 |
Harvard University |
Prof. Martin Karplus |
Novel Mathematical Methods for Computing Reaction Paths of the Large Scale Conformational Changes in Protein |
|
Current Position: Assistant Professor, Dept. of Bio Engineering, Rice University |
** McCarthy, Janice
11/01/96-10/31/98 |
Duke University |
Prof. J.A. McCammon |
Markov Chain Monte Carlo Methods for accurate simulation of the physical properties of helical peptides: Analysis of the generalized ensemble approach |
|
Currently a Graduate Student at Duke University |
** Mogilner, Alexander
(Postdoctoral)
09/01/95-08/31/96 |
University of California, Berkeley |
Prof. George Oster |
DNA Motors and Protein Mechanics |
|
Current Position: Associate Professor and Chancellor’s Fellow, Department of Mathematics, University of California, Davis |
** Naor, Dalit
(Postdoctoral)
11/01/91-10/31/93 |
Stanford University Medical Center |
Prof. Douglas L. Brutlag |
Combinatorial and Parametric Algorithms for Analyzing Biological Sequences |
|
Current Position: Research Fellow, Network Computing and Security Group, IBM Haifa Research Lab, Tel Aviv Annex |
** Olmsted-West, Martha
(Postdoctoral)
07/01/92-06/30/94 |
University of Colorado Health Sciences Center |
Prof. Paul Hagerman |
Distribution of Counterions Around Finite Nucleic Acis Structures |
|
Onoa-Rojas, Bibiana
(Postdoctoral)
7/1/01-6/30/02 |
University of California, Berkeley |
Prof. Carlos Bustamante and Prof. Ignacio Tinoco |
Unfolding of Tetrahymena Thermophila Group I RNA enzyme at the Single Molecule Level |
|
** Powell, Robyn
08/01/97-10/31/99 |
University of Nebraska |
Prof. Lawrence J. Parkhurst |
Time-Dependent Laser Fluorescence Studies of DNA Transcription |
|
Currently finishing Ph.D. work at the Chemistry Department, University of Nebraska |
** Qian, Hong
(Postdoctoral)
09/01/92-08/31/94 |
California Institute of Technology |
Prof. John Hopfield |
Cooperativity in Neural Networks and Protein Folding Prediction |
|
Current Position: Assistant Professor Adjunct in Bioengineering, Department of Applied Mathematics, University of Washington |
** Ratnanather,
Tilak
(Postdoctoral)
10/01/94-09/30/96 |
Johns Hopkins University |
Prof. Aleksander Popel |
The Biophysics of the Substrate Cisternae of the Cochlear Outer Hair Cell |
|
Current Position: Research Associate, Center for Imaging Science, Departments of Biomedical Engineering and Electrical and Computer Engineering, The Johns Hopkins University School of Medicine |
** Regan, Jeffrey
(Postdoctoral)
09/01/94-08/31/96 |
University of California, San Diego |
Prof. Jose Onuchic |
Further Development of the Theory of Electron Tunneling in Proteins With a Specific Study of the Structure Function Relationship in Azurin, Myoglobin, Chochrome c and Other Proteins |
|
** Richards, Robyn
08/01/97-10/31/99 |
University of Nebraska |
Prof. Lawrence J. Parkhurst |
See Robyn Powell |
|
*/** Rosenberg, Noah
(Graduate)
09/01/00-08/31/01 |
Stanford University |
Prof. Marcus W. Feldman |
Mathematical Models of Chromosome Evolution |
|
* Schnitzer, Mark
(Graduate)
09/01/98-08/31/99 |
Princeton University |
Prof. Steven M. Block |
Statistical Kinetics of Processive Molecular Motors |
|
** Sjolander, Kimmen
06/01/96-06/01/97 |
University of California, Santa Cruz |
Prof. David Haussler |
A Bayesian Method for Phylogenetic Inference in Protein |
|
Current Position: Assistant Professor, Department of Bioengineering, University of California, Berkeley |
** Smith, Doug
06/01/96-09/30/98 |
Stanford University |
Prof. Steven Chu |
Physical Studies of DNA Using Fluorescence Microscopy and Optical Tweezers |
|
Storey, John D.
(Graduate)
09/01/01-08/31/02 |
Stanford University |
Prof. Rob Tibshirani |
Applications of Statistics to DNA Microarrays: Detecting Differentially Expressed Genes in Replicated Microarray Experiments |
|
Current Position: Assistant Professor, Department of Statistics, University of California, Berkeley |
* Swigon, David
(Graduate)
06/01/97-05/31/99 |
Rutgers University |
Prof. Bernard D. Coleman |
Theory of the Dependence on Linking Number of the Tertiary Structure of DNA Minicircles with Self-Contact |
|
Current Position: Research Associate at the Department of Chemistry, Rutgers |
** Walker, Wynn
09/01/96-08/31/98 |
University of California, Los Angles |
Prof. Richard E. Dickerson |
Development of Mathematical/Computer Algorithms for the Design of DNA Minor Groove Sequence Reading Molecules |
|
** Warren, Gregory
(Postdoctoral)
09/01/95-08/31/97 |
Yale University |
Prof. Axel Brunger |
The Development and Testing of NMR Structure Assessment Techniques |
|
Current Position: Scientist at Smith-Kline-Beecham |
* Webb, Bobbie-Jo
(Graduate)
08/01/99-07/31/01 |
Rensselaer |
Prof. Charles E. Lawrence |
Bayesian Alignment Algorithms for the Identification of Gene Regulatory Modules |
|
** Wolf, Ethan
07/01/98-06/30/99 |
Whitehead Institute |
Prof. Peter Kim |
Towards the Prediction of Partnering in Coiled Coils |
|
** Wukovitz, Stephanie
(Graduate)
09/01/95-08/31/97 |
University of California, Los Angeles |
Prof. Todd Yeates |
An Explanation for the Macromolecular Space Group Frequency Phenomenon |
|
*/** Yona,
Golan
(Postdoctoral)
09/01/98-08/31/99
09/01/99-08/31/00 |
Stanford University |
Prof. Michael Levitt |
Global Organization of All Proteins |
|
Current Position: Assistant Professor, Department of Computer Science, Cornell University |
** Zhou, Yaoqi
(Postdoctoral)
09/01/95-08/31/96 |
Harvard University |
Prof. Martin Karplus |
The Molecular Mechanisms of Solute Effects on Protein Stability |
|
Current Position: Assistant Professor at Dept. of Physology/Biophysic |
* Fellows supported by Burroughs Wellcome Fund
** Fellows supported by National Science Foundation |
