BIOMATHEMATICS PROJECT COURSE

MAP 6437, Section 01, Spring 2009

(Reference #02325 in Directory of Classes)

Professor: Dr M-G
Office:202B Love (in which I hold office hours)
Phone:(850 64)4 2580
Email:mesterto@math.fsu.edu
Web site:http://www.math.fsu.edu/~mesterto
Course page: http://www.math.fsu.edu/~mesterto/bp.html (this page—but obviously, if you are reading a hard copy of it, then you won't be able to activate the links until you go online)
Class meets: in 200 LOV, Tuesdays and Thursdays 3:35-4:50 p.m.
Prerequisite: Professor M-G's consent
Credit: 3 semester hours
Text: None
Course goal: This is a learning-by-doing course. The goal is threefold:
  1. To improve both oral and written presentational skills.
  2. To become a better criticizer of science.
  3. To discover how to write a grant proposal for the National Science Foundation (NSF).
So the doing is likewise threefold. You will be required:
  1. To give three oral presentations on a project of your choosing; to become proficient at typesetting scientific documents, preferably with LaTeX; to use LaTeX, or an equivalent, to write the project description (Section d) for an NSF grant proposal in the required format; and to submit it to me in timely fashion as a .pdf file—in draft form by various agreed deadlines during the semester, and in final form by April 23.
  2. To read and criticize the other students' proposals, and to submit written evaluations of them (again as .pdf files) to me by various agreed deadlines. In effect the other students in the class will serve as a mock NSF review panel for your proposal.
  3. (a subset of 1.) To draft an NSF grant proposal in the required format. NSF limits you to 15 pages (excluding references, including pictures), but that includes space for describing results of previously funded projects and other issues, which probably do not yet apply to you. So aim for 10-12 pages (and remember that a really good picture can be worth at least 1000 words).
Tentative schedule: In a course of this nature it is important to maintain a somewhat flexible schedule and adapt as the semester progresses. For example, some of you may already have chosen a project and be virtually ready for your first presentation; whereas others may not have chosen a project yet—in which case, choosing a project is clearly the first priority. Nevertheless, the necessary flexibility is subject to constraints (most obviously, everything must be finished by the end of the semester). So deadlines, once set, must be observed. We probably cannot deviate much from the following broad outline. In any event—throughout the semester—I will discuss expectations for each stage of the process in class, and at the end of each period we will agree on an agenda for the following period before adjourning.

Weeks 1-3 Finalize your choice of project. Prepare for your first presentation.
Weeks 2-4 Make your first presentation (of a length to be determined, but somewhere in the range of 15-30 minutes). It should describe, in general terms, your choice of project, your current state of knowledge and the question(s) you propose to answer.
Weeks 2-7 Work on the first written draft of your project description. Keep in mind that this document could be—although it does not have to be—the basis of your Advanced Topics or Candidacy exam.
Weeks 5-7 Make your second presentation. It should identity the specific aims of your project and describe how you propose to obtain preliminary results.
Week 7 Submit the first written draft of your project description (to me, as a .pdf file). Aim for 6-10 pages. I will redistribute these documents to the entire class.
Week 8 Submit written evaluations of the other students' first drafts of their project descriptions (to me, as .pdf files). Because we would like to mimic the NSF review process as closely as possible, these evaluations should be anonymous (so don't sign): before I redistribute them to the entire class, I will incorporate them into a single .pdf for each student. Nevertheless, be encouraging (as opposed to negative). Good criticism is always constructive and helpful. Your job is to help your fellow students improve their proposals as much as possible, and their job is to do the same for you. (A good maxim is to criticize so that, should you inadvertently reveal that you were the author of an evaluation, then nobody would be the least bit offended.)
Weeks 8-11 Work on the second written draft of your project description.
Week 9 Participate in a classroom discussion of how to improve each proposal, thus concluding the first review stage.
Weeks 10-12 Make your third and final presentation. It should describe your preliminary results.
Week 11 Submit the second written draft of your project description. Aim for 10-12 pages. (This guideline is intended less to suggest that you will need only 2 pages to describe preliminary results than to indicate that your preliminary results may supersede a significant part of your earlier draft.)
Week 12 Submit written evaluations of the other students' second drafts of their project descriptions.
Weeks 12-15 Work on the final version of your project description.
Week 13 Participate in a classroom discussion of how to improve each proposal, thus concluding the second review stage.
Week 15 Submit the final version of your project description.
Your grade: Will be based on attendance (10%) and the quality of your written work: 60% for your proposal, 30% for your (constructive and helpful) evaluations of everyone else's proposals.
Communication:It is your responsibility to register here for a (free) FSU computer account so that I can send you email, which you are expected to check regularly. If you prefer to read your email elsewhere then you can arrange to have messages forwarded, but you must still obtain an FSU account in the first instance.
Your name: I don't know who you are, but because everything works so much better when I do, I would like to learn your name as soon as possible. Please take a sheet of paper, fold it in half, write your first name in large letters on one side and stand it up on your desk so that I can see it. (Write whatever you want me to call you—if you're a William who likes to be called Dubya, write Dubya, not William.) Please bring your name plate to class until I have finally learnt your name (which will probably take significantly longer than it used to take when I started out).
Etiquette: You are firmly bound by Florida State University's Academic Honor Code (briefly, you have the responsibility to uphold the highest standards of academic integrity in your own work, to refuse to tolerate violations of academic integrity in the University community, and to foster a high sense of integrity and social responsibility on the part of the University community). Although you may—and should!—discuss your ideas with others, the proposal you present must be your very own work.
Disabilities:If you have a disability requiring academic accommodations, then not only should you register with the Student Disability Resource Center (SDRC), but also you should bring me written confirmation from SDRC during the first week of class.

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